Геном прокариот/Материалы:NC 007514
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LOCUS NC_007514 2572079 bp DNA circular BCT 09-AUG-2007
DEFINITION Chlorobium chlorochromatii CaD3, complete genome.
ACCESSION NC_007514
VERSION NC_007514.1 GI:78187984
KEYWORDS .
SOURCE Chlorobium chlorochromatii CaD3
ORGANISM Chlorobium chlorochromatii CaD3
Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
Chlorobium/Pelodictyon group; Chlorobium.
REFERENCE 1 (bases 1 to 2572079)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Ivanova,N. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Chlorobium chlorochromatii CaD3
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2572079)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-OCT-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2572079)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
Schmutz,J., Larimer,F., Land,M., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000108.
URL -- http://www.jgi.doe.gov
Source DNA and bacteria available from Don Bryant (dab14@psu.edu)
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 10616 | 10692 | - | 77 | 78187984 | Cag_t01 | - | 13 Val tRNA |
| 75584 | 75656 | + | 73 | 78187984 | Cag_t02 | - | 02 Ala tRNA |
| 102592 | 104100 | + | 1509 | 78187984 | Cag_r1 | - | 16S ribosomal RNA |
| 104236 | 104312 | + | 77 | 78187984 | Cag_t03 | - | 14 Ile tRNA |
| 104342 | 104417 | + | 76 | 78187984 | Cag_t04 | - | 02 Ala tRNA |
| 104552 | 107472 | + | 2921 | 78187984 | Cag_r2 | - | 23S ribosomal RNA |
| 107553 | 107670 | + | 118 | 78187984 | Cag_r3 | - | 5S ribosomal RNA |
| 164847 | 164922 | + | 76 | 78187984 | Cag_t05 | - | 11 Arg tRNA |
| 206029 | 206105 | - | 77 | 78187984 | Cag_t06 | - | 13 Val tRNA |
| 352954 | 353031 | - | 78 | 78187984 | Cag_t07 | - | 06 Asp tRNA |
| 399282 | 399354 | + | 73 | 78187984 | Cag_t08 | - | 12 Thr tRNA |
| 399367 | 399451 | + | 85 | 78187984 | Cag_t09 | - | 18 Tyr tRNA |
| 399460 | 399532 | + | 73 | 78187984 | Cag_t10 | - | 12 Thr tRNA |
| 399570 | 399642 | + | 73 | 78187984 | Cag_t11 | - | 20 Trp tRNA |
| 457755 | 457827 | + | 73 | 78187984 | Cag_t12 | - | 17 Phe tRNA |
| 539473 | 539545 | + | 73 | 78187984 | Cag_t13 | - | 10 Lys tRNA |
| 539576 | 539657 | + | 82 | 78187984 | Cag_t14 | - | 15 Leu tRNA |
| 570229 | 570318 | - | 90 | 78187984 | Cag_t15 | - | 08 Ser tRNA |
| 570333 | 570415 | - | 83 | 78187984 | Cag_t16 | - | 08 Ser tRNA |
| 570522 | 570612 | - | 91 | 78187984 | Cag_t17 | - | 08 Ser tRNA |
| 614696 | 614771 | - | 76 | 78187984 | Cag_t18 | - | 02 Ala tRNA |
| 904266 | 904353 | - | 88 | 78187984 | Cag_t19 | - | 15 Leu tRNA |
| 904368 | 904452 | - | 85 | 78187984 | Cag_t20 | - | 15 Leu tRNA |
| 1161857 | 1161943 | + | 87 | 78187984 | Cag_t21 | - | 08 Ser tRNA |
| 1264724 | 1264800 | + | 77 | 78187984 | Cag_t22 | - | 16 Met tRNA |
| 1264812 | 1264887 | + | 76 | 78187984 | Cag_t23 | - | 01 Gly tRNA |
| 1300530 | 1300606 | + | 77 | 78187984 | Cag_t24 | - | 13 Val tRNA |
| 1498748 | 1498832 | + | 85 | 78187984 | Cag_t25 | - | 15 Leu tRNA |
| 1501918 | 1501991 | + | 74 | 78187984 | Cag_t26 | - | 19 Cys tRNA |
| 1582093 | 1582168 | - | 76 | 78187984 | Cag_t27 | - | 03 Pro tRNA |
| 1582178 | 1582253 | - | 76 | 78187984 | Cag_t28 | - | 11 Arg tRNA |
| 1613413 | 1613498 | + | 86 | 78187984 | Cag_t29 | - | 15 Leu tRNA |
| 1748934 | 1749010 | + | 77 | 78187984 | Cag_t30 | - | 16 Met tRNA |
| 1749027 | 1749100 | + | 74 | 78187984 | Cag_t31 | - | 04 Glu tRNA |
| 1749108 | 1749184 | + | 77 | 78187984 | Cag_t32 | - | 11 Arg tRNA |
| 1749199 | 1749275 | + | 77 | 78187984 | Cag_t33 | - | 05 Gln tRNA |
| 1760904 | 1760979 | - | 76 | 78187984 | Cag_t34 | - | 01 Gly tRNA |
| 1867271 | 1867346 | - | 76 | 78187984 | Cag_t35 | - | 16 Met tRNA |
| 2008021 | 2008096 | - | 76 | 78187984 | Cag_t36 | - | 10 Lys tRNA |
| 2025159 | 2025233 | - | 75 | 78187984 | Cag_t37 | - | 04 Glu tRNA |
| 2025247 | 2025323 | - | 77 | 78187984 | Cag_t38 | - | 09 His tRNA |
| 2025346 | 2025421 | - | 76 | 78187984 | Cag_t39 | - | 11 Arg tRNA |
| 2025445 | 2025517 | - | 73 | 78187984 | Cag_t40 | - | 03 Pro tRNA |
| 2030701 | 2030775 | - | 75 | 78187984 | Cag_t41 | - | 05 Gln tRNA |
| 2060078 | 2060151 | - | 74 | 78187984 | Cag_t42 | - | 03 Pro tRNA |
| 2165727 | 2165798 | + | 72 | 78187984 | Cag_t43 | - | 07 Asn tRNA |
| 2354631 | 2354706 | - | 76 | 78187984 | Cag_t44 | - | 01 Gly tRNA |
| 2554003 | 2554075 | + | 73 | 78187984 | Cag_t45 | - | 12 Thr tRNA |

