Материалы:NC 004603

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   LOCUS       NC_004603            3288558 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete
               sequence.
   ACCESSION   NC_004603
   VERSION     NC_004603.1  GI:28896774
   KEYWORDS    .
   SOURCE      Vibrio parahaemolyticus RIMD 2210633
     ORGANISM  Vibrio parahaemolyticus RIMD 2210633
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Vibrio.
   REFERENCE   1
     AUTHORS   Makino,K., Oshima,K., Kurokawa,K., Yokoyama,K., Uda,T.,
               Tagomori,K., Iijima,Y., Najima,M., Nakano,M., Yamashita,A.,
               Kubota,Y., Kimura,S., Yasunaga,T., Honda,T., Shinagawa,H.,
               Hattori,M. and Iida,T.
     TITLE     Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
               distinct from that of V cholerae
     JOURNAL   Lancet 361 (9359), 743-749 (2003)
      PUBMED   12620739
   REFERENCE   2
     AUTHORS   Nasu,H., Iida,T., Sugahara,T., Yamaichi,Y., Park,K.S., Yokoyama,K.,
               Makino,K., Shinagawa,H. and Honda,T.
     TITLE     A filamentous phage associated with recent pandemic Vibrio
               parahaemolyticus O3:K6 strains
     JOURNAL   J. Clin. Microbiol. 38 (6), 2156-2161 (2000)
      PUBMED   10834969
   REFERENCE   3  (bases 1 to 3288558)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-MAR-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3288558)
     AUTHORS   Oshima,K., Kurokawa,K., Makino,K., Yokoyama,K., Yasunaga,T.,
               Honda,T., Shinagawa,H., Hattori,M. and Iida,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (09-APR-2002) Ken Kurokawa, Osaka University, Genome
               Information Research Center; 3-1, Yamadaoka, Suita, Osaka 565-0871,
               Japan (E-mail:ken@gen-info.osaka-u.ac.jp,
               URL:http://www.gen-info.osaka-u.ac.jp/, Tel:81-6-6879-8365,
               Fax:81-6-6879-2047)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000031.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
33633	35103	+	1471	28896774	VPr001	-	16S ribosomal RNA
35273	35348	+	76	28896774	VPt001	-	^{04 Glu tRNA}
35351	35426	+	76	28896774	VPt002	-	^{10 Lys tRNA}
35457	35532	+	76	28896774	VPt003	-	^{13 Val tRNA}
35852	38742	+	2891	28896774	VPr002	-	23S ribosomal RNA
38832	38951	+	120	28896774	VPr003	-	5S ribosomal RNA
50014	50090	+	77	28896774	VPt004	-	^{11 Arg tRNA}
50123	50198	+	76	28896774	VPt005	-	^{09 His tRNA}
50271	50347	+	77	28896774	VPt006	-	^{03 Pro tRNA}
50397	50472	+	76	28896774	VPt007	-	^{09 His tRNA}
50497	50573	+	77	28896774	VPt008	-	^{03 Pro tRNA}
403769	403844	-	76	28896774	VPt009	-	^{16 Met tRNA}
581626	583096	+	1471	28896774	VPr004	-	16S ribosomal RNA
583274	583349	+	76	28896774	VPt010	-	^{02 Ala tRNA}
583362	583437	+	76	28896774	VPt011	-	^{04 Glu tRNA}
583703	586593	+	2891	28896774	VPr005	-	23S ribosomal RNA
586683	586802	+	120	28896774	VPr006	-	5S ribosomal RNA
586831	586907	+	77	28896774	VPt012	-	^{06 Asp tRNA}
586943	587019	+	77	28896774	VPt013	-	^{20 Trp tRNA}
771968	772052	-	85	28896774	VPt014	-	^{15 Leu tRNA}
772106	772180	-	75	28896774	VPt015	-	^{05 Gln tRNA}
772228	772312	-	85	28896774	VPt016	-	^{15 Leu tRNA}
772342	772426	-	85	28896774	VPt017	-	^{15 Leu tRNA}
772474	772550	-	77	28896774	VPt018	-	^{16 Met tRNA}
772575	772659	-	85	28896774	VPt019	-	^{15 Leu tRNA}
772712	772786	-	75	28896774	VPt020	-	^{05 Gln tRNA}
772816	772900	-	85	28896774	VPt021	-	^{15 Leu tRNA}
772954	773030	-	77	28896774	VPt022	-	^{16 Met tRNA}
773055	773139	-	85	28896774	VPt023	-	^{15 Leu tRNA}
773192	773266	-	75	28896774	VPt024	-	^{05 Gln tRNA}
773296	773380	-	85	28896774	VPt025	-	^{15 Leu tRNA}
773435	773509	-	75	28896774	VPt026	-	^{05 Gln tRNA}
773539	773623	-	85	28896774	VPt027	-	^{15 Leu tRNA}
773659	773733	-	75	28896774	VPt028	-	^{05 Gln tRNA}
773782	773866	-	85	28896774	VPt029	-	^{15 Leu tRNA}
773897	773981	-	85	28896774	VPt030	-	^{15 Leu tRNA}
774059	774135	-	77	28896774	VPt031	-	^{16 Met tRNA}
774213	774287	-	75	28896774	VPt032	-	^{05 Gln tRNA}
774442	774518	-	77	28896774	VPt033	-	^{16 Met tRNA}
789515	789591	+	77	28896774	VPt034	-	^{03 Pro tRNA}
804917	804993	-	77	28896774	VPt035	-	^{11 Arg tRNA}
912549	912625	+	77	28896774	VPt036	-	^{11 Arg tRNA}
978106	978190	-	85	28896774	VPt037	-	^{18 Tyr tRNA}
978272	978356	-	85	28896774	VPt038	-	^{18 Tyr tRNA}
978438	978522	-	85	28896774	VPt039	-	^{18 Tyr tRNA}
978604	978688	-	85	28896774	VPt040	-	^{18 Tyr tRNA}
978770	978854	-	85	28896774	VPt041	-	^{18 Tyr tRNA}
978936	979020	-	85	28896774	VPt042	-	^{18 Tyr tRNA}
1121082	1121169	+	88	28896774	VPt043	-	^{08 Ser tRNA}
1437460	1437536	+	77	28896774	VPt044	-	^{13 Val tRNA}
1437569	1437645	+	77	28896774	VPt045	-	^{13 Val tRNA}
2034204	2034279	-	76	28896774	VPt046	-	^{01 Gly tRNA}
2034290	2034376	-	87	28896774	VPt047	-	^{15 Leu tRNA}
2034453	2034528	-	76	28896774	VPt048	-	^{01 Gly tRNA}
2034566	2034639	-	74	28896774	VPt049	-	^{19 Cys tRNA}
2210208	2210283	+	76	28896774	VPt050	-	^{07 Asn tRNA}
2239837	2239927	+	91	28896774	VPt051	-	^{08 Ser tRNA}
2582455	2582531	-	77	28896774	VPt052	-	^{16 Met tRNA}
2582588	2582671	-	84	28896774	VPt053	-	^{15 Leu tRNA}
2686780	2686856	-	77	28896774	VPt054	-	^{11 Arg tRNA}
2686914	2686990	-	77	28896774	VPt055	-	^{11 Arg tRNA}
2687048	2687124	-	77	28896774	VPt056	-	^{11 Arg tRNA}
2687182	2687258	-	77	28896774	VPt057	-	^{11 Arg tRNA}
2687316	2687392	-	77	28896774	VPt058	-	^{11 Arg tRNA}
2687450	2687526	-	77	28896774	VPt059	-	^{11 Arg tRNA}
2687583	2687659	-	77	28896774	VPt060	-	^{11 Arg tRNA}
2687870	2687946	-	77	28896774	VPt061	-	^{11 Arg tRNA}
2687978	2688069	-	92	28896774	VPt062	-	^{08 Ser tRNA}
2770086	2770161	+	76	28896774	VPt063	-	^{17 Phe tRNA}
2770227	2770302	+	76	28896774	VPt064	-	^{12 Thr tRNA}
2770310	2770385	+	76	28896774	VPt065	-	^{17 Phe tRNA}
2770456	2770531	+	76	28896774	VPt066	-	^{07 Asn tRNA}
2770603	2770678	+	76	28896774	VPt067	-	^{12 Thr tRNA}
2770686	2770761	+	76	28896774	VPt068	-	^{17 Phe tRNA}
2770805	2770880	+	76	28896774	VPt069	-	^{07 Asn tRNA}
2773013	2773088	+	76	28896774	VPt070	-	^{17 Phe tRNA}
2773140	2773215	+	76	28896774	VPt071	-	^{12 Thr tRNA}
2773237	2773312	+	76	28896774	VPt072	-	^{07 Asn tRNA}
2773352	2773427	+	76	28896774	VPt073	-	^{12 Thr tRNA}
2773443	2773518	+	76	28896774	VPt074	-	^{07 Asn tRNA}
2775658	2775734	-	77	28896774	VPt075	-	^{06 Asp tRNA}
2775764	2775884	-	121	28896774	VPr007	-	5S ribosomal RNA
2775940	2776015	-	76	28896774	VPt076	-	^{12 Thr tRNA}
2776114	2776233	-	120	28896774	VPr008	-	5S ribosomal RNA
2776323	2779213	-	2891	28896774	VPr009	-	23S ribosomal RNA
2779478	2779553	-	76	28896774	VPt077	-	^{02 Ala tRNA}
2779595	2779671	-	77	28896774	VPt078	-	^{14 Ile tRNA}
2779817	2781287	-	1471	28896774	VPr010	-	16S ribosomal RNA
2790320	2790404	-	85	28896774	VPt079	-	^{15 Leu tRNA}
2881915	2881991	-	77	28896774	VPt080	-	^{06 Asp tRNA}
2882020	2882139	-	120	28896774	VPr011	-	5S ribosomal RNA
2882229	2885119	-	2891	28896774	VPr012	-	23S ribosomal RNA
2885385	2885460	-	76	28896774	VPt081	-	^{04 Glu tRNA}
2885630	2887100	-	1471	28896774	VPr013	-	16S ribosomal RNA
2988610	2988686	-	77	28896774	VPt082	-	^{16 Met tRNA}
2988743	2988818	-	76	28896774	VPt083	-	^{01 Gly tRNA}
2988837	2988913	-	77	28896774	VPt084	-	^{16 Met tRNA}
2988949	2989024	-	76	28896774	VPt085	-	^{01 Gly tRNA}
2989075	2989150	-	76	28896774	VPt086	-	^{01 Gly tRNA}
2989200	2989275	-	76	28896774	VPt087	-	^{01 Gly tRNA}
2989325	2989400	-	76	28896774	VPt088	-	^{01 Gly tRNA}
2989431	2989507	-	77	28896774	VPt089	-	^{16 Met tRNA}
2989563	2989638	-	76	28896774	VPt090	-	^{01 Gly tRNA}
2989669	2989745	-	77	28896774	VPt091	-	^{16 Met tRNA}
2989785	2989860	-	76	28896774	VPt092	-	^{01 Gly tRNA}
2989880	2989956	-	77	28896774	VPt093	-	^{16 Met tRNA}
2989992	2990067	-	76	28896774	VPt094	-	^{01 Gly tRNA}
3062167	3062243	-	77	28896774	VPt095	-	^{20 Trp tRNA}
3062312	3062388	-	77	28896774	VPt096	-	^{06 Asp tRNA}
3062417	3062536	-	120	28896774	VPr014	-	5S ribosomal RNA
3062626	3065516	-	2891	28896774	VPr015	-	23S ribosomal RNA
3065781	3065856	-	76	28896774	VPt097	-	^{13 Val tRNA}
3065871	3065946	-	76	28896774	VPt098	-	^{02 Ala tRNA}
3065979	3066054	-	76	28896774	VPt099	-	^{10 Lys tRNA}
3066057	3066132	-	76	28896774	VPt100	-	^{04 Glu tRNA}
3066302	3067772	-	1471	28896774	VPr016	-	16S ribosomal RNA
3068091	3068210	-	120	28896774	VPr017	-	5S ribosomal RNA
3068300	3071190	-	2891	28896774	VPr018	-	23S ribosomal RNA
3071548	3073018	-	1471	28896774	VPr019	-	16S ribosomal RNA
3122180	3122255	-	76	28896774	VPt101	-	^{12 Thr tRNA}
3122269	3122343	-	75	28896774	VPt102	-	^{01 Gly tRNA}
3122379	3122463	-	85	28896774	VPt103	-	^{18 Tyr tRNA}
3122500	3122575	-	76	28896774	VPt104	-	^{12 Thr tRNA}
3128159	3128235	-	77	28896774	VPt105	-	^{06 Asp tRNA}
3128264	3128383	-	120	28896774	VPr020	-	5S ribosomal RNA
3128473	3131363	-	2891	28896774	VPr021	-	23S ribosomal RNA
3131721	3133191	-	1471	28896774	VPr022	-	16S ribosomal RNA
3133510	3133629	-	120	28896774	VPr023	-	5S ribosomal RNA
3133719	3136609	-	2891	28896774	VPr024	-	23S ribosomal RNA
3136967	3138437	-	1471	28896774	VPr025	-	16S ribosomal RNA
3193080	3193170	-	91	28896774	VPt106	-	^{08 Ser tRNA}
3193238	3193357	-	120	28896774	VPr026	-	5S ribosomal RNA
3193447	3196340	-	2894	28896774	VPr027	-	23S ribosomal RNA
3196605	3196680	-	76	28896774	VPt107	-	^{02 Ala tRNA}
3196722	3196798	-	77	28896774	VPt108	-	^{14 Ile tRNA}
3196944	3198414	-	1471	28896774	VPr028	-	16S ribosomal RNA
3234328	3234404	-	77	28896774	VPt109	-	^{06 Asp tRNA}
3234433	3234552	-	120	28896774	VPr029	-	5S ribosomal RNA
3234642	3237532	-	2891	28896774	VPr030	-	23S ribosomal RNA
3237852	3237927	-	76	28896774	VPt110	-	^{13 Val tRNA}
3237958	3238033	-	76	28896774	VPt111	-	^{10 Lys tRNA}
3238036	3238111	-	76	28896774	VPt112	-	^{04 Glu tRNA}
3238281	3239751	-	1471	28896774	VPr031	-	16S ribosomal RNA