Материалы:NC 004605
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LOCUS NC_004605 1877212 bp DNA circular BCT 17-JAN-2006
DEFINITION Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete
sequence.
ACCESSION NC_004605
VERSION NC_004605.1 GI:28899855
KEYWORDS .
SOURCE Vibrio parahaemolyticus RIMD 2210633
ORGANISM Vibrio parahaemolyticus RIMD 2210633
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1
AUTHORS Makino,K., Oshima,K., Kurokawa,K., Yokoyama,K., Uda,T.,
Tagomori,K., Iijima,Y., Najima,M., Nakano,M., Yamashita,A.,
Kubota,Y., Kimura,S., Yasunaga,T., Honda,T., Shinagawa,H.,
Hattori,M. and Iida,T.
TITLE Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
distinct from that of V cholerae
JOURNAL Lancet 361 (9359), 743-749 (2003)
PUBMED 12620739
REFERENCE 2
AUTHORS Nasu,H., Iida,T., Sugahara,T., Yamaichi,Y., Park,K.S., Yokoyama,K.,
Makino,K., Shinagawa,H. and Honda,T.
TITLE A filamentous phage associated with recent pandemic Vibrio
parahaemolyticus O3:K6 strains
JOURNAL J. Clin. Microbiol. 38 (6), 2156-2161 (2000)
PUBMED 10834969
REFERENCE 3 (bases 1 to 1877212)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-MAR-2003) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 1877212)
AUTHORS Oshima,K., Kurokawa,K., Makino,K., Yokoyama,K., Yasunaga,T.,
Honda,T., Shinagawa,H., Hattori,M. and Iida,T.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2002) Ken Kurokawa, Osaka University, Genome
Information Research Center; 3-1, Yamadaoka, Suita, Osaka 565-0871,
Japan (E-mail:ken@gen-info.osaka-u.ac.jp,
URL:http://www.gen-info.osaka-u.ac.jp/, Tel:81-6-6879-8365,
Fax:81-6-6879-2047)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BA000032.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 132915 | 134385 | + | 1471 | 28899855 | VPAr01 | - | 16S ribosomal RNA |
| 134557 | 134632 | + | 76 | 28899855 | VPAt01 | - | 04 Glu tRNA |
| 134635 | 134710 | + | 76 | 28899855 | VPAt02 | - | 10 Lys tRNA |
| 134725 | 134800 | + | 76 | 28899855 | VPAt03 | - | 02 Ala tRNA |
| 134814 | 134889 | + | 76 | 28899855 | VPAt04 | - | 13 Val tRNA |
| 135166 | 138056 | + | 2891 | 28899855 | VPAr02 | - | 23S ribosomal RNA |
| 138146 | 138265 | + | 120 | 28899855 | VPAr03 | - | 5S ribosomal RNA |
| 138333 | 138423 | + | 91 | 28899855 | VPAt05 | - | 08 Ser tRNA |
| 192979 | 193062 | - | 84 | 28899855 | VPAt06 | - | 15 Leu tRNA |
| 605006 | 605096 | - | 91 | 28899855 | VPAt07 | - | 08 Ser tRNA |
| 1040086 | 1040159 | - | 74 | 28899855 | VPAt08 | - | 19 Cys tRNA |
| 1040232 | 1040318 | - | 87 | 28899855 | VPAt09 | - | 15 Leu tRNA |
| 1052570 | 1052643 | - | 74 | 28899855 | VPAt10 | - | 19 Cys tRNA |
| 1052717 | 1052803 | - | 87 | 28899855 | VPAt11 | - | 15 Leu tRNA |
| 1060973 | 1061048 | - | 76 | 28899855 | VPAt12 | - | 01 Gly tRNA |
| 1061052 | 1061125 | - | 74 | 28899855 | VPAt13 | - | 19 Cys tRNA |
| 1156216 | 1156290 | + | 75 | 28899855 | VPAt14 | - | 01 Gly tRNA |
