Материалы:NC 005126
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LOCUS NC_005126 5688987 bp DNA circular BCT 03-DEC-2005
DEFINITION Photorhabdus luminescens subsp. laumondii TTO1, complete genome.
ACCESSION NC_005126
VERSION NC_005126.1 GI:37524032
KEYWORDS complete genome.
SOURCE Photorhabdus luminescens subsp. laumondii TTO1
ORGANISM Photorhabdus luminescens subsp. laumondii TTO1
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Photorhabdus.
REFERENCE 1 (bases 1 to 5688987)
AUTHORS Duchaud,E., Rusniok,C., Frangeul,L., Buchrieser,C., Givaudan,A.,
Taourit,S., Bocs,S., Boursaux-Eude,C., Chandler,M., Charles,J.F.,
Dassa,E., Derose,R., Derzelle,S., Freyssinet,G., Gaudriault,S.,
Medigue,C., Lanois,A., Powell,K., Siguier,P., Vincent,R.,
Wingate,V., Zouine,M., Glaser,P., Boemare,N., Danchin,A. and
Kunst,F.
TITLE The genome sequence of the entomopathogenic bacterium Photorhabdus
luminescens
JOURNAL Nat. Biotechnol. 21 (11), 1307-1313 (2003)
PUBMED 14528314
REFERENCE 2 (bases 1 to 5688987)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2003) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5688987)
AUTHORS Duchaud,E., Frangeul,L., Rusniok,C. and Kunst,F.
TITLE Direct Submission
JOURNAL Submitted (23-APR-2003) Genopole, Institut Pasteur, 25 rue du
Docteur Roux, Paris Cedex 15 75724, France
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX470251.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 58438 | 59982 | + | 1545 | 37524032 | plur001 | - | 16S ribosomal RNA |
| 60065 | 60140 | + | 76 | 37524032 | plut001 | - | 04 Glu tRNA |
| 60328 | 63236 | + | 2909 | 37524032 | plur002 | - | 23S ribosomal RNA |
| 63378 | 63495 | + | 118 | 37524032 | plur003 | - | 5S ribosomal RNA |
| 132063 | 132153 | + | 91 | 37524032 | plut002 | - | Sec tRNA |
| 313480 | 313556 | + | 77 | 37524032 | plut003 | - | 03 Pro tRNA |
| 536233 | 537777 | + | 1545 | 37524032 | plur004 | - | 16S ribosomal RNA |
| 537860 | 537935 | + | 76 | 37524032 | plut004 | - | 04 Glu tRNA |
| 538123 | 541031 | + | 2909 | 37524032 | plur005 | - | 23S ribosomal RNA |
| 541151 | 541268 | + | 118 | 37524032 | plur006 | - | 5S ribosomal RNA |
| 744356 | 744432 | - | 77 | 37524032 | plut005 | - | 16 Met tRNA |
| 744462 | 744538 | - | 77 | 37524032 | plut006 | - | 16 Met tRNA |
| 744628 | 744704 | - | 77 | 37524032 | plut007 | - | 16 Met tRNA |
| 801957 | 803501 | + | 1545 | 37524032 | plur007 | - | 16S ribosomal RNA |
| 803571 | 803647 | + | 77 | 37524032 | plut008 | - | 14 Ile tRNA |
| 803780 | 803855 | + | 76 | 37524032 | plut009 | - | 02 Ala tRNA |
| 804018 | 807036 | + | 3019 | 37524032 | plur008 | - | 23S ribosomal RNA |
| 807154 | 807271 | + | 118 | 37524032 | plur009 | - | 5S ribosomal RNA |
| 807474 | 807550 | + | 77 | 37524032 | plut010 | - | 06 Asp tRNA |
| 1085591 | 1085667 | + | 77 | 37524032 | plut011 | - | 06 Asp tRNA |
| 1351817 | 1351892 | - | 76 | 37524032 | plut012 | - | 17 Phe tRNA |
| 1449113 | 1449205 | + | 93 | 37524032 | plut013 | - | 08 Ser tRNA |
| 1449216 | 1449292 | + | 77 | 37524032 | plut014 | - | 11 Arg tRNA |
| 1449380 | 1449456 | + | 77 | 37524032 | plut015 | - | 11 Arg tRNA |
| 1449543 | 1449619 | + | 77 | 37524032 | plut016 | - | 11 Arg tRNA |
| 1472782 | 1474326 | + | 1545 | 37524032 | plur010 | - | 16S ribosomal RNA |
| 1474395 | 1474471 | + | 77 | 37524032 | plut017 | - | 14 Ile tRNA |
| 1474601 | 1474676 | + | 76 | 37524032 | plut018 | - | 02 Ala tRNA |
| 1474839 | 1477747 | + | 2909 | 37524032 | plur011 | - | 23S ribosomal RNA |
| 1477865 | 1477982 | + | 118 | 37524032 | plur012 | - | 5S ribosomal RNA |
| 1524379 | 1524453 | - | 75 | 37524032 | plut019 | - | 05 Gln tRNA |
| 1524459 | 1524535 | - | 77 | 37524032 | plut020 | - | 16 Met tRNA |
| 1524586 | 1524660 | - | 75 | 37524032 | plut021 | - | 05 Gln tRNA |
| 1524713 | 1524787 | - | 75 | 37524032 | plut022 | - | 05 Gln tRNA |
| 1524816 | 1524900 | - | 85 | 37524032 | plut023 | - | 15 Leu tRNA |
| 1524906 | 1524982 | - | 77 | 37524032 | plut024 | - | 16 Met tRNA |
| 1681642 | 1681717 | - | 76 | 37524032 | plut025 | - | 02 Ala tRNA |
| 1681774 | 1681849 | - | 76 | 37524032 | plut026 | - | 02 Ala tRNA |
| 1683915 | 1683990 | + | 76 | 37524032 | plut027 | - | 13 Val tRNA |
| 1684021 | 1684096 | + | 76 | 37524032 | plut028 | - | 13 Val tRNA |
| 1684142 | 1684217 | + | 76 | 37524032 | plut029 | - | 13 Val tRNA |
| 1684261 | 1684336 | + | 76 | 37524032 | plut030 | - | 10 Lys tRNA |
| 1684372 | 1684447 | + | 76 | 37524032 | plut031 | - | 10 Lys tRNA |
| 1685548 | 1685620 | + | 73 | 37524032 | plut032 | - | 10 Lys tRNA |
| 1749948 | 1750023 | + | 76 | 37524032 | plut033 | - | 10 Lys tRNA |
| 1750058 | 1750133 | + | 76 | 37524032 | plut034 | - | 10 Lys tRNA |
| 1750171 | 1750243 | + | 73 | 37524032 | plut035 | - | 10 Lys tRNA |
| 1750345 | 1750417 | + | 73 | 37524032 | plut036 | - | 10 Lys tRNA |
| 1750519 | 1750591 | + | 73 | 37524032 | plut037 | - | 10 Lys tRNA |
| 1750693 | 1750765 | + | 73 | 37524032 | plut038 | - | 10 Lys tRNA |
| 1750867 | 1750939 | + | 73 | 37524032 | plut039 | - | 10 Lys tRNA |
| 1751041 | 1751113 | + | 73 | 37524032 | plut040 | - | 10 Lys tRNA |
| 1751215 | 1751284 | + | 70 | 37524032 | plut041 | - | 10 Lys tRNA |
| 2129833 | 2129920 | + | 88 | 37524032 | plut042 | - | 08 Ser tRNA |
| 2186131 | 2186206 | - | 76 | 37524032 | plut043 | - | 07 Asn tRNA |
| 2186465 | 2186540 | - | 76 | 37524032 | plut044 | - | 07 Asn tRNA |
| 2186915 | 2186990 | - | 76 | 37524032 | plut045 | - | 07 Asn tRNA |
| 2188924 | 2188999 | - | 76 | 37524032 | plut046 | - | 07 Asn tRNA |
| 2337428 | 2337503 | + | 76 | 37524032 | plut047 | - | 10 Lys tRNA |
| 2395983 | 2396069 | - | 87 | 37524032 | plut048 | - | 15 Leu tRNA |
| 2396076 | 2396149 | - | 74 | 37524032 | plut049 | - | 19 Cys tRNA |
| 2396198 | 2396273 | - | 76 | 37524032 | plut050 | - | 01 Gly tRNA |
| 2470432 | 2470521 | - | 90 | 37524032 | plut051 | - | 08 Ser tRNA |
| 2950577 | 2950661 | + | 85 | 37524032 | plut052 | - | 18 Tyr tRNA |
| 3055783 | 3055859 | + | 77 | 37524032 | plut053 | - | 13 Val tRNA |
| 3055908 | 3055984 | + | 77 | 37524032 | plut054 | - | 13 Val tRNA |
| 3409291 | 3409367 | + | 77 | 37524032 | plut055 | - | 03 Pro tRNA |
| 3538549 | 3538624 | - | 76 | 37524032 | plut056 | - | 12 Thr tRNA |
| 3545776 | 3545863 | - | 88 | 37524032 | plut057 | - | 08 Ser tRNA |
| 3771002 | 3771076 | + | 75 | 37524032 | plut058 | - | 11 Arg tRNA |
| 4181294 | 4181367 | - | 74 | 37524032 | plut059 | - | 01 Gly tRNA |
| 4668147 | 4668223 | + | 77 | 37524032 | plut060 | - | 16 Met tRNA |
| 4831374 | 4831449 | + | 76 | 37524032 | plut061 | - | 17 Phe tRNA |
| 4975498 | 4975584 | + | 87 | 37524032 | plut062 | - | 15 Leu tRNA |
| 4975653 | 4975739 | + | 87 | 37524032 | plut063 | - | 15 Leu tRNA |
| 5043247 | 5043320 | + | 74 | 37524032 | plut064 | - | 11 Arg tRNA |
| 5139413 | 5139530 | - | 118 | 37524032 | plur013 | - | 5S ribosomal RNA |
| 5139650 | 5142668 | - | 3019 | 37524032 | plur014 | - | 23S ribosomal RNA |
| 5142831 | 5142906 | - | 76 | 37524032 | plut065 | - | 02 Ala tRNA |
| 5143036 | 5143112 | - | 77 | 37524032 | plut066 | - | 14 Ile tRNA |
| 5143181 | 5144725 | - | 1545 | 37524032 | plur015 | - | 16S ribosomal RNA |
| 5229034 | 5229118 | - | 85 | 37524032 | plut067 | - | 15 Leu tRNA |
| 5293754 | 5293830 | - | 77 | 37524032 | plut068 | - | 16 Met tRNA |
| 5293889 | 5293977 | - | 89 | 37524032 | plut069 | - | 15 Leu tRNA |
| 5359645 | 5359720 | - | 76 | 37524032 | plut070 | - | 01 Gly tRNA |
| 5359786 | 5359861 | - | 76 | 37524032 | plut071 | - | 01 Gly tRNA |
| 5359917 | 5359992 | - | 76 | 37524032 | plut072 | - | 01 Gly tRNA |
| 5420383 | 5420459 | - | 77 | 37524032 | plut073 | - | 03 Pro tRNA |
| 5420502 | 5420588 | - | 87 | 37524032 | plut074 | - | 15 Leu tRNA |
| 5420604 | 5420679 | - | 76 | 37524032 | plut075 | - | 09 His tRNA |
| 5420756 | 5420832 | - | 77 | 37524032 | plut076 | - | 11 Arg tRNA |
| 5469493 | 5469568 | - | 76 | 37524032 | plut077 | - | 20 Trp tRNA |
| 5469578 | 5469654 | - | 77 | 37524032 | plut078 | - | 06 Asp tRNA |
| 5469857 | 5469974 | - | 118 | 37524032 | plur016 | - | 5S ribosomal RNA |
| 5470116 | 5473024 | - | 2909 | 37524032 | plur017 | - | 23S ribosomal RNA |
| 5473212 | 5473287 | - | 76 | 37524032 | plut079 | - | 04 Glu tRNA |
| 5473370 | 5474914 | - | 1545 | 37524032 | plur018 | - | 16S ribosomal RNA |
| 5501651 | 5501726 | - | 76 | 37524032 | plut080 | - | 12 Thr tRNA |
| 5501733 | 5501807 | - | 75 | 37524032 | plut081 | - | 01 Gly tRNA |
| 5501909 | 5501993 | - | 85 | 37524032 | plut082 | - | 18 Tyr tRNA |
| 5502009 | 5502084 | - | 76 | 37524032 | plut083 | - | 12 Thr tRNA |
| 5505628 | 5505754 | - | 127 | 37524032 | plur019 | - | 5S ribosomal RNA |
| 5505765 | 5505840 | - | 76 | 37524032 | plut084 | - | 12 Thr tRNA |
| 5505880 | 5505997 | - | 118 | 37524032 | plur020 | - | 5S ribosomal RNA |
| 5506139 | 5509047 | - | 2909 | 37524032 | plur021 | - | 23S ribosomal RNA |
| 5509235 | 5509310 | - | 76 | 37524032 | plut085 | - | 04 Glu tRNA |
| 5509393 | 5510937 | - | 1545 | 37524032 | plur022 | - | 16S ribosomal RNA |
