Материалы:NC 007384
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LOCUS NC_007384 4825265 bp DNA circular BCT 23-JAN-2007
DEFINITION Shigella sonnei Ss046, complete genome.
ACCESSION NC_007384
VERSION NC_007384.1 GI:74310614
KEYWORDS .
SOURCE Shigella sonnei Ss046
ORGANISM Shigella sonnei Ss046
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Shigella.
REFERENCE 1 (bases 1 to 4825265)
AUTHORS Yang,F., Yang,J., Zhang,X., Chen,L., Jiang,Y., Yan,Y., Tang,X.,
Wang,J., Xiong,Z., Dong,J., Xue,Y., Zhu,Y., Xu,X., Sun,L., Chen,S.,
Nie,H., Peng,J., Xu,J., Wang,Y., Yuan,Z., Wen,Y., Yao,Z., Shen,Y.,
Qiang,B., Hou,Y., Yu,J. and Jin,Q.
TITLE Genome dynamics and diversity of Shigella species, the etiologic
agents of bacillary dysentery
JOURNAL Nucleic Acids Res. 33 (19), 6445-6458 (2005)
PUBMED 16275786
REFERENCE 2 (bases 1 to 4825265)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4825265)
AUTHORS Jin,Q., Yang,F., Yang,J., Jiang,Y., Yan,Y., Chen,L., Zhang,X.,
Peng,J., Tang,X., Xiong,Z., Nie,H., Dong,J., Xue,Y., Xu,X., Zhu,Y.,
Shen,Y., Qiang,B. and Hou,Y.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2004) State Key Laboratory for Moleclular
Virology and Genetic Engineering, Microbial Genome Center of
Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
Beijing 100176, P. R. China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000038.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 240084 | 241625 | + | 1542 | 74310614 | SSON_0215 | - | 16S ribosomal RNA |
| 241694 | 241770 | + | 77 | 74310614 | SSON_0216 | - | 14 Ile tRNA |
| 241813 | 241888 | + | 76 | 74310614 | SSON_0217 | - | 02 Ala tRNA |
| 242072 | 244975 | + | 2904 | 74310614 | SSON_0218 | - | 23S ribosomal RNA |
| 245069 | 245187 | + | 119 | 74310614 | SSON_0219 | - | 5S ribosomal RNA |
| 245365 | 245441 | + | 77 | 74310614 | SSON_0220 | - | 06 Asp tRNA |
| 253369 | 253445 | + | 77 | 74310614 | SSON_0230 | - | 06 Asp tRNA |
| 314849 | 314924 | + | 76 | 74310614 | SSON_0286 | - | 12 Thr tRNA |
| 539681 | 539757 | + | 77 | 74310614 | SSON_0511 | - | 11 Arg tRNA |
| 658535 | 658609 | - | 75 | 74310614 | SSON_0618 | - | 05 Gln tRNA |
| 658646 | 658720 | - | 75 | 74310614 | SSON_0619 | - | 05 Gln tRNA |
| 658769 | 658845 | - | 77 | 74310614 | SSON_0621 | - | 16 Met tRNA |
| 658861 | 658935 | - | 75 | 74310614 | SSON_0622 | - | 05 Gln tRNA |
| 658970 | 659044 | - | 75 | 74310614 | SSON_0624 | - | 05 Gln tRNA |
| 659068 | 659152 | - | 85 | 74310614 | SSON_0625 | - | 15 Leu tRNA |
| 659161 | 659237 | - | 77 | 74310614 | SSON_0626 | - | 16 Met tRNA |
| 740953 | 741028 | + | 76 | 74310614 | SSON_0695 | - | 10 Lys tRNA |
| 741178 | 741253 | + | 76 | 74310614 | SSON_0696 | - | 13 Val tRNA |
| 741257 | 741332 | + | 76 | 74310614 | SSON_0697 | - | 10 Lys tRNA |
| 741381 | 741456 | + | 76 | 74310614 | SSON_0698 | - | 10 Lys tRNA |
| 741490 | 741565 | + | 76 | 74310614 | SSON_0699 | - | 10 Lys tRNA |
| 939703 | 939790 | - | 88 | 74310614 | SSON_0884 | - | 08 Ser tRNA |
| 1050493 | 1050580 | - | 88 | 74310614 | SSON_0976 | - | 08 Ser tRNA |
| 1125195 | 1125282 | - | 88 | 74310614 | SSON_1041 | - | 08 Ser tRNA |
| 1285232 | 1285307 | + | 76 | 74310614 | SSON_1207 | - | 01 Gly tRNA |
| 1285362 | 1285435 | + | 74 | 74310614 | SSON_1208 | - | 19 Cys tRNA |
| 1285448 | 1285534 | + | 87 | 74310614 | SSON_1209 | - | 15 Leu tRNA |
| 1336980 | 1337056 | - | 77 | 74310614 | SSON_1258 | - | 11 Arg tRNA |
| 1337157 | 1337232 | - | 76 | 74310614 | SSON_1259 | - | 16 Met tRNA |
| 1565385 | 1565461 | - | 77 | 74310614 | SSON_1490 | - | 13 Val tRNA |
| 1565466 | 1565542 | - | 77 | 74310614 | SSON_1491 | - | 13 Val tRNA |
| 1874677 | 1874751 | - | 75 | 74310614 | SSON_1773 | - | 01 Gly tRNA |
| 1874755 | 1874830 | - | 76 | 74310614 | SSON_1774 | - | 12 Thr tRNA |
| 1874833 | 1874909 | - | 77 | 74310614 | SSON_1775 | - | 11 Arg tRNA |
| 1874911 | 1874987 | - | 77 | 74310614 | SSON_1776 | - | 16 Met tRNA |
| 1995713 | 1995789 | - | 77 | 74310614 | SSON_1896 | - | 11 Arg tRNA |
| 1995803 | 1995879 | - | 77 | 74310614 | SSON_1897 | - | 11 Arg tRNA |
| 1995887 | 1995962 | - | 76 | 74310614 | SSON_1898 | - | 16 Met tRNA |
| 2047907 | 2047991 | + | 85 | 74310614 | SSON_1948 | - | 18 Tyr tRNA |
| 2127532 | 2127621 | - | 90 | 74310614 | SSON_2034 | - | 08 Ser tRNA |
| 2128613 | 2128688 | + | 76 | 74310614 | SSON_2036 | - | 07 Asn tRNA |
| 2142989 | 2143064 | - | 76 | 74310614 | SSON_2043 | - | 07 Asn tRNA |
| 2144813 | 2144888 | + | 76 | 74310614 | SSON_2045 | - | 07 Asn tRNA |
| 2150262 | 2150337 | + | 76 | 74310614 | SSON_2050 | - | 07 Asn tRNA |
| 2358939 | 2359015 | + | 77 | 74310614 | SSON_2245 | - | 03 Pro tRNA |
| 2540386 | 2540460 | + | 75 | 74310614 | SSON_2405 | - | 11 Arg tRNA |
| 2630627 | 2630702 | - | 76 | 74310614 | SSON_2487 | - | 02 Ala tRNA |
| 2630742 | 2630817 | - | 76 | 74310614 | SSON_2488 | - | 02 Ala tRNA |
| 2633517 | 2633592 | + | 76 | 74310614 | SSON_2492 | - | 13 Val tRNA |
| 2633638 | 2633713 | + | 76 | 74310614 | SSON_2493 | - | 13 Val tRNA |
| 2633760 | 2633835 | + | 76 | 74310614 | SSON_2494 | - | 13 Val tRNA |
| 2633840 | 2633915 | + | 76 | 74310614 | SSON_2495 | - | 10 Lys tRNA |
| 2872403 | 2872521 | - | 119 | 74310614 | SSON_2714 | - | 5S ribosomal RNA |
| 2872615 | 2875518 | - | 2904 | 74310614 | SSON_2715 | - | 23S ribosomal RNA |
| 2875712 | 2875787 | - | 76 | 74310614 | SSON_2716 | - | 04 Glu tRNA |
| 2875873 | 2877414 | - | 1542 | 74310614 | SSON_2717 | - | 16S ribosomal RNA |
| 2935018 | 2935092 | - | 75 | 74310614 | SSON_2785 | - | 01 Gly tRNA |
| 2935096 | 2935171 | - | 76 | 74310614 | SSON_2786 | - | 12 Thr tRNA |
| 2935174 | 2935250 | - | 77 | 74310614 | SSON_2787 | - | 11 Arg tRNA |
| 2935252 | 2935328 | - | 77 | 74310614 | SSON_2788 | - | 16 Met tRNA |
| 2945408 | 2945483 | + | 76 | 74310614 | SSON_2800 | - | 16 Met tRNA |
| 2979008 | 2979084 | - | 77 | 74310614 | SSON_2835 | - | 11 Arg tRNA |
| 2979283 | 2979359 | - | 77 | 74310614 | SSON_2836 | - | 11 Arg tRNA |
| 2979423 | 2979499 | - | 77 | 74310614 | SSON_2837 | - | 11 Arg tRNA |
| 2979563 | 2979639 | - | 77 | 74310614 | SSON_2838 | - | 11 Arg tRNA |
| 2979643 | 2979735 | - | 93 | 74310614 | SSON_2839 | - | 08 Ser tRNA |
| 3117001 | 3117077 | + | 77 | 74310614 | SSON_2971 | - | 16 Met tRNA |
| 3117111 | 3117187 | + | 77 | 74310614 | SSON_2972 | - | 16 Met tRNA |
| 3117221 | 3117297 | + | 77 | 74310614 | SSON_2973 | - | 16 Met tRNA |
| 3168683 | 3168752 | - | 70 | 74310614 | SSON_3015 | - | 01 Gly tRNA |
| 3371268 | 3371343 | + | 76 | 74310614 | SSON_3207 | - | 16 Met tRNA |
| 3403158 | 3403233 | - | 76 | 74310614 | SSON_3228 | - | 17 Phe tRNA |
| 3495151 | 3495227 | - | 77 | 74310614 | SSON_3317 | - | 16 Met tRNA |
| 3501145 | 3501231 | - | 87 | 74310614 | SSON_3322 | - | 15 Leu tRNA |
| 3596216 | 3596331 | - | 116 | 74310614 | SSON_3413 | - | 5S ribosomal RNA |
| 3596372 | 3596447 | - | 76 | 74310614 | SSON_3414 | - | 12 Thr tRNA |
| 3596460 | 3596578 | - | 119 | 74310614 | SSON_3415 | - | 5S ribosomal RNA |
| 3596672 | 3599575 | - | 2904 | 74310614 | SSON_3416 | - | 23S ribosomal RNA |
| 3599759 | 3599834 | - | 76 | 74310614 | SSON_3417 | - | 02 Ala tRNA |
| 3599877 | 3599953 | - | 77 | 74310614 | SSON_3418 | - | 14 Ile tRNA |
| 3600022 | 3601563 | - | 1542 | 74310614 | SSON_3419 | - | 16S ribosomal RNA |
| 3928571 | 3928665 | - | 95 | 74310614 | SSON_3745 | - | Sec tRNA |
| 4038560 | 4038636 | + | 77 | 74310614 | SSON_3845 | - | 03 Pro tRNA |
| 4148249 | 4149790 | + | 1542 | 74310614 | SSON_3926 | - | 16S ribosomal RNA |
| 4149876 | 4149951 | + | 76 | 74310614 | SSON_3927 | - | 04 Glu tRNA |
| 4150145 | 4153048 | + | 2904 | 74310614 | SSON_3928 | - | 23S ribosomal RNA |
| 4153142 | 4153260 | + | 119 | 74310614 | SSON_3929 | - | 5S ribosomal RNA |
| 4153313 | 4153389 | + | 77 | 74310614 | SSON_3930 | - | 06 Asp tRNA |
| 4153398 | 4153473 | + | 76 | 74310614 | SSON_3931 | - | 20 Trp tRNA |
| 4193063 | 4193139 | + | 77 | 74310614 | SSON_3969 | - | 11 Arg tRNA |
| 4193198 | 4193273 | + | 76 | 74310614 | SSON_3970 | - | 09 His tRNA |
| 4193294 | 4193380 | + | 87 | 74310614 | SSON_3971 | - | 15 Leu tRNA |
| 4193423 | 4193499 | + | 77 | 74310614 | SSON_3972 | - | 03 Pro tRNA |
| 4252785 | 4254326 | + | 1542 | 74310614 | SSON_4024 | - | 16S ribosomal RNA |
| 4254412 | 4254487 | + | 76 | 74310614 | SSON_4025 | - | 04 Glu tRNA |
| 4254681 | 4257584 | + | 2904 | 74310614 | SSON_4026 | - | 23S ribosomal RNA |
| 4257678 | 4257796 | + | 119 | 74310614 | SSON_4027 | - | 5S ribosomal RNA |
| 4386044 | 4387585 | + | 1542 | 74310614 | SSON_4141 | - | 16S ribosomal RNA |
| 4387671 | 4387746 | + | 76 | 74310614 | SSON_4142 | - | 04 Glu tRNA |
| 4387940 | 4390843 | + | 2904 | 74310614 | SSON_4143 | - | 23S ribosomal RNA |
| 4390937 | 4391055 | + | 119 | 74310614 | SSON_4144 | - | 5S ribosomal RNA |
| 4394519 | 4394594 | + | 76 | 74310614 | SSON_4149 | - | 12 Thr tRNA |
| 4394603 | 4394687 | + | 85 | 74310614 | SSON_4150 | - | 18 Tyr tRNA |
| 4394804 | 4394878 | + | 75 | 74310614 | SSON_4151 | - | 01 Gly tRNA |
| 4394885 | 4394960 | + | 76 | 74310614 | SSON_4152 | - | 12 Thr tRNA |
| 4426338 | 4427879 | + | 1542 | 74310614 | SSON_4180 | - | 16S ribosomal RNA |
| 4427965 | 4428040 | + | 76 | 74310614 | SSON_4181 | - | 04 Glu tRNA |
| 4428234 | 4431137 | + | 2904 | 74310614 | SSON_4182 | - | 23S ribosomal RNA |
| 4431231 | 4431349 | + | 119 | 74310614 | SSON_4183 | - | 5S ribosomal RNA |
| 4588285 | 4588360 | - | 76 | 74310614 | SSON_4317 | - | 17 Phe tRNA |
| 4619087 | 4619162 | + | 76 | 74310614 | SSON_4348 | - | 01 Gly tRNA |
| 4619320 | 4619395 | + | 76 | 74310614 | SSON_4349 | - | 01 Gly tRNA |
| 4619431 | 4619506 | + | 76 | 74310614 | SSON_4350 | - | 01 Gly tRNA |
| 4726868 | 4726952 | + | 85 | 74310614 | SSON_4455 | - | 15 Leu tRNA |
| 4790431 | 4790517 | - | 87 | 74310614 | SSON_4516 | - | 15 Leu tRNA |
| 4790552 | 4790638 | - | 87 | 74310614 | SSON_4517 | - | 15 Leu tRNA |
| 4790667 | 4790753 | - | 87 | 74310614 | SSON_4518 | - | 15 Leu tRNA |
| 4790788 | 4790874 | - | 87 | 74310614 | SSON_4519 | - | 15 Leu tRNA |
| 4790903 | 4790989 | - | 87 | 74310614 | SSON_4520 | - | 15 Leu tRNA |
