Материалы:NC 007606
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LOCUS NC_007606 4369232 bp DNA circular BCT 02-MAR-2006
DEFINITION Shigella dysenteriae Sd197, complete genome.
ACCESSION NC_007606
VERSION NC_007606.1 GI:82775382
KEYWORDS .
SOURCE Shigella dysenteriae Sd197
ORGANISM Shigella dysenteriae Sd197
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Shigella.
REFERENCE 1 (bases 1 to 4369232)
AUTHORS Yang,F., Yang,J., Zhang,X., Chen,L., Jiang,Y., Yan,Y., Tang,X.,
Wang,J., Xiong,Z., Dong,J., Xue,Y., Zhu,Y., Xu,X., Sun,L., Chen,S.,
Nie,H., Peng,J., Xu,J., Wang,Y., Yuan,Z., Wen,Y., Yao,Z., Shen,Y.,
Qiang,B., Hou,Y., Yu,J. and Jin,Q.
TITLE Genome dynamics and diversity of Shigella species, the etiologic
agents of bacillary dysentery
JOURNAL Nucleic Acids Res. 33 (19), 6445-6458 (2005)
PUBMED 16275786
REFERENCE 2 (bases 1 to 4369232)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4369232)
AUTHORS Jin,Q., Yang,F., Yang,J., Jiang,Y., Yan,Y., Chen,L., Zhang,X.,
Peng,J., Tang,X., Xiong,Z., Nie,H., Dong,J., Xue,Y., Xu,X., Zhu,Y.,
Shen,Y., Qiang,B. and Hou,Y.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2004) State Key Laboratory for Moleclular
Virology and Genetic Engineering, Microbial Genome Center of
Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
Beijing 100176, P. R. China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000034.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 224744 | 226285 | + | 1542 | 82775382 | SDY_0220 | - | 16S ribosomal RNA |
| 226354 | 226430 | + | 77 | 82775382 | SDY_0221 | - | 14 Ile tRNA |
| 226473 | 226548 | + | 76 | 82775382 | SDY_0222 | - | 02 Ala tRNA |
| 226723 | 229624 | + | 2902 | 82775382 | SDY_0223 | - | 23S ribosomal RNA |
| 229718 | 229836 | + | 119 | 82775382 | SDY_0224 | - | 5S ribosomal RNA |
| 229889 | 229965 | + | 77 | 82775382 | SDY_0225 | - | 06 Asp tRNA |
| 238096 | 238172 | + | 77 | 82775382 | SDY_0235 | - | 06 Asp tRNA |
| 254305 | 254381 | + | 77 | 82775382 | SDY_0259 | - | 11 Arg tRNA |
| 460403 | 460478 | - | 76 | 82775382 | SDY_0472 | - | 12 Thr tRNA |
| 552537 | 552610 | - | 74 | 82775382 | SDY_0573 | - | 01 Gly tRNA |
| 552614 | 552689 | - | 76 | 82775382 | SDY_0574 | - | 12 Thr tRNA |
| 552692 | 552768 | - | 77 | 82775382 | SDY_0575 | - | 11 Arg tRNA |
| 552770 | 552846 | - | 77 | 82775382 | SDY_0576 | - | 16 Met tRNA |
| 569916 | 569990 | - | 75 | 82775382 | SDY_0600 | - | 05 Gln tRNA |
| 570039 | 570115 | - | 77 | 82775382 | SDY_0602 | - | 16 Met tRNA |
| 570131 | 570205 | - | 75 | 82775382 | SDY_0603 | - | 05 Gln tRNA |
| 570240 | 570314 | - | 75 | 82775382 | SDY_0605 | - | 05 Gln tRNA |
| 570338 | 570422 | - | 85 | 82775382 | SDY_0606 | - | 15 Leu tRNA |
| 570431 | 570507 | - | 77 | 82775382 | SDY_0607 | - | 16 Met tRNA |
| 653182 | 653257 | + | 76 | 82775382 | SDY_0691 | - | 10 Lys tRNA |
| 653404 | 653479 | + | 76 | 82775382 | SDY_0692 | - | 10 Lys tRNA |
| 653513 | 653588 | + | 76 | 82775382 | SDY_0693 | - | 10 Lys tRNA |
| 838023 | 838099 | - | 77 | 82775382 | SDY_0890 | - | 03 Pro tRNA |
| 894284 | 894371 | - | 88 | 82775382 | SDY_0946 | - | 08 Ser tRNA |
| 952153 | 952240 | + | 88 | 82775382 | SDY_1005 | - | 08 Ser tRNA |
| 1005132 | 1005221 | - | 90 | 82775382 | SDY_1071 | - | 08 Ser tRNA |
| 1006213 | 1006288 | + | 76 | 82775382 | SDY_1073 | - | 07 Asn tRNA |
| 1032986 | 1033061 | + | 76 | 82775382 | SDY_1107 | - | 01 Gly tRNA |
| 1033116 | 1033189 | + | 74 | 82775382 | SDY_1108 | - | 19 Cys tRNA |
| 1033202 | 1033288 | + | 87 | 82775382 | SDY_1109 | - | 15 Leu tRNA |
| 1189324 | 1189408 | - | 85 | 82775382 | SDY_1283 | - | 18 Tyr tRNA |
| 1324384 | 1324459 | + | 76 | 82775382 | SDY_1437 | - | 16 Met tRNA |
| 1324558 | 1324634 | + | 77 | 82775382 | SDY_1438 | - | 11 Arg tRNA |
| 1727495 | 1727571 | + | 77 | 82775382 | SDY_1892 | - | 13 Val tRNA |
| 1727576 | 1727652 | + | 77 | 82775382 | SDY_1893 | - | 13 Val tRNA |
| 1810224 | 1810300 | + | 77 | 82775382 | SDY_1994 | - | 16 Met tRNA |
| 1810302 | 1810378 | + | 77 | 82775382 | SDY_1995 | - | 11 Arg tRNA |
| 1810381 | 1810456 | + | 76 | 82775382 | SDY_1996 | - | 12 Thr tRNA |
| 1810460 | 1810534 | + | 75 | 82775382 | SDY_1997 | - | 01 Gly tRNA |
| 2045201 | 2045276 | - | 76 | 82775382 | SDY_2244 | - | 07 Asn tRNA |
| 2047609 | 2047684 | - | 76 | 82775382 | SDY_2247 | - | 07 Asn tRNA |
| 2049416 | 2049491 | + | 76 | 82775382 | SDY_2250 | - | 07 Asn tRNA |
| 2180695 | 2180782 | + | 88 | 82775382 | SDY_2378 | - | 08 Ser tRNA |
| 2348583 | 2348657 | + | 75 | 82775382 | SDY_2552 | - | 11 Arg tRNA |
| 2393975 | 2394050 | - | 76 | 82775382 | SDY_2595 | - | 02 Ala tRNA |
| 2398497 | 2398572 | + | 76 | 82775382 | SDY_2601 | - | 13 Val tRNA |
| 2398616 | 2398691 | + | 76 | 82775382 | SDY_2602 | - | 13 Val tRNA |
| 2398696 | 2398771 | + | 76 | 82775382 | SDY_2603 | - | 10 Lys tRNA |
| 2621924 | 2622042 | - | 119 | 82775382 | SDY_2831 | - | 5S ribosomal RNA |
| 2622136 | 2625037 | - | 2902 | 82775382 | SDY_2832 | - | 23S ribosomal RNA |
| 2625222 | 2625297 | - | 76 | 82775382 | SDY_2833 | - | 04 Glu tRNA |
| 2625384 | 2626925 | - | 1542 | 82775382 | SDY_2834 | - | 16S ribosomal RNA |
| 2671698 | 2671774 | - | 77 | 82775382 | SDY_2888 | - | 11 Arg tRNA |
| 2671973 | 2672049 | - | 77 | 82775382 | SDY_2889 | - | 11 Arg tRNA |
| 2672245 | 2672321 | - | 77 | 82775382 | SDY_2890 | - | 11 Arg tRNA |
| 2672325 | 2672417 | - | 93 | 82775382 | SDY_2891 | - | 08 Ser tRNA |
| 2804124 | 2804200 | + | 77 | 82775382 | SDY_3032 | - | 16 Met tRNA |
| 2804235 | 2804311 | + | 77 | 82775382 | SDY_3033 | - | 16 Met tRNA |
| 2878460 | 2878535 | - | 76 | 82775382 | SDY_3103 | - | 17 Phe tRNA |
| 3015902 | 3015977 | + | 76 | 82775382 | SDY_3253 | - | 16 Met tRNA |
| 3108924 | 3109000 | - | 77 | 82775382 | SDY_3350 | - | 16 Met tRNA |
| 3113477 | 3113563 | - | 87 | 82775382 | SDY_3355 | - | 15 Leu tRNA |
| 3205862 | 3205978 | - | 117 | 82775382 | SDY_3449 | - | 5S ribosomal RNA |
| 3206019 | 3206094 | - | 76 | 82775382 | SDY_3450 | - | 12 Thr tRNA |
| 3206107 | 3206225 | - | 119 | 82775382 | SDY_3451 | - | 5S ribosomal RNA |
| 3206319 | 3209220 | - | 2902 | 82775382 | SDY_3452 | - | 23S ribosomal RNA |
| 3209395 | 3209470 | - | 76 | 82775382 | SDY_3453 | - | 02 Ala tRNA |
| 3209513 | 3209589 | - | 77 | 82775382 | SDY_3454 | - | 14 Ile tRNA |
| 3209658 | 3211199 | - | 1542 | 82775382 | SDY_3455 | - | 16S ribosomal RNA |
| 3444784 | 3444902 | - | 119 | 82775382 | SDY_3716 | - | 5S ribosomal RNA |
| 3444996 | 3447897 | - | 2902 | 82775382 | SDY_3717 | - | 23S ribosomal RNA |
| 3448082 | 3448157 | - | 76 | 82775382 | SDY_3718 | - | 04 Glu tRNA |
| 3448244 | 3449785 | - | 1542 | 82775382 | SDY_3719 | - | 16S ribosomal RNA |
| 3482839 | 3482914 | - | 76 | 82775382 | SDY_3749 | - | 12 Thr tRNA |
| 3482921 | 3482995 | - | 75 | 82775382 | SDY_3750 | - | 01 Gly tRNA |
| 3483112 | 3483196 | - | 85 | 82775382 | SDY_3751 | - | 18 Tyr tRNA |
| 3483205 | 3483280 | - | 76 | 82775382 | SDY_3752 | - | 12 Thr tRNA |
| 3486746 | 3486864 | - | 119 | 82775382 | SDY_3757 | - | 5S ribosomal RNA |
| 3486958 | 3489859 | - | 2902 | 82775382 | SDY_3758 | - | 23S ribosomal RNA |
| 3490044 | 3490119 | - | 76 | 82775382 | SDY_3759 | - | 04 Glu tRNA |
| 3490206 | 3491747 | - | 1542 | 82775382 | SDY_3760 | - | 16S ribosomal RNA |
| 3619839 | 3619957 | - | 119 | 82775382 | SDY_3890 | - | 5S ribosomal RNA |
| 3620051 | 3622952 | - | 2902 | 82775382 | SDY_3891 | - | 23S ribosomal RNA |
| 3623127 | 3623202 | - | 76 | 82775382 | SDY_3892 | - | 02 Ala tRNA |
| 3623245 | 3623321 | - | 77 | 82775382 | SDY_3893 | - | 14 Ile tRNA |
| 3623390 | 3624931 | - | 1542 | 82775382 | SDY_3894 | - | 16S ribosomal RNA |
| 3680433 | 3680509 | - | 77 | 82775382 | SDY_3948 | - | 03 Pro tRNA |
| 3680552 | 3680638 | - | 87 | 82775382 | SDY_3949 | - | 15 Leu tRNA |
| 3680659 | 3680734 | - | 76 | 82775382 | SDY_3950 | - | 09 His tRNA |
| 3680793 | 3680869 | - | 77 | 82775382 | SDY_3951 | - | 11 Arg tRNA |
| 3718795 | 3718870 | - | 76 | 82775382 | SDY_3986 | - | 20 Trp tRNA |
| 3718879 | 3718955 | - | 77 | 82775382 | SDY_3987 | - | 06 Asp tRNA |
| 3719008 | 3719126 | - | 119 | 82775382 | SDY_3988 | - | 5S ribosomal RNA |
| 3719220 | 3722121 | - | 2902 | 82775382 | SDY_3989 | - | 23S ribosomal RNA |
| 3722306 | 3722381 | - | 76 | 82775382 | SDY_3990 | - | 04 Glu tRNA |
| 3722468 | 3724009 | - | 1542 | 82775382 | SDY_3991 | - | 16S ribosomal RNA |
| 4019704 | 4019788 | + | 85 | 82775382 | SDY_4289 | - | 15 Leu tRNA |
| 4142716 | 4142791 | - | 76 | 82775382 | SDY_4427 | - | 01 Gly tRNA |
| 4142827 | 4142902 | - | 76 | 82775382 | SDY_4428 | - | 01 Gly tRNA |
| 4142939 | 4143014 | - | 76 | 82775382 | SDY_4429 | - | 01 Gly tRNA |
| 4153366 | 4153441 | - | 76 | 82775382 | SDY_4439 | - | 17 Phe tRNA |
| 4186256 | 4186326 | + | 71 | 82775382 | SDY_4471 | - | 15 Leu tRNA |
| 4284566 | 4284642 | - | 77 | 82775382 | SDY_4568 | - | 03 Pro tRNA |
| 4293303 | 4293397 | + | 95 | 82775382 | SDY_4579 | - | Sec tRNA |
| 4333508 | 4333594 | - | 87 | 82775382 | SDY_4627 | - | 15 Leu tRNA |
| 4333629 | 4333716 | - | 88 | 82775382 | SDY_4628 | - | 15 Leu tRNA |
| 4333745 | 4333831 | - | 87 | 82775382 | SDY_4629 | - | 15 Leu tRNA |
