Материалы:NC 009434
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LOCUS NC_009434 4567418 bp DNA circular BCT 03-JUL-2007
DEFINITION Pseudomonas stutzeri A1501, complete genome.
ACCESSION NC_009434
VERSION NC_009434.1 GI:146280397
KEYWORDS .
SOURCE Pseudomonas stutzeri A1501
ORGANISM Pseudomonas stutzeri A1501
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 4567418)
AUTHORS Yan,Y., Yang,J., Dou,Y., Ping,S., Chen,M., Yao,Z., Li,H., Lu,W.,
Zhang,W., Peng,J., Liu,W., He,S., Geng,L., Zhang,X., Yang,F.,
Li,D., Lin,Z., Wang,Y., Elmerich,C., Lin,M. and Jin,Q.
TITLE Complete genome sequence of the metabolically versatile and
root-associated nitrogen-fixing bacterium Pseudomonas stutzeri
A1501
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4567418)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-MAY-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4567418)
AUTHORS Yan,Y., Jin,Q., Yang,T., Wang,Y. and Lin,M.
TITLE Direct Submission
JOURNAL Submitted (03-APR-2006) The Biotechnology Research Institute, The
Chinese Academy of Agricultural Sciences, 12 Zhongguancun South
Street, HaiDian, Beijing, Beijing 100081, P. R. China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000304.
Bacteria available from Prof. Lin Min: linmin57@vip.163.com.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 111101 | 111177 | - | 77 | 146280397 | PST_0094 | - | 11 Arg tRNA |
| 297607 | 297682 | - | 76 | 146280397 | PST_0260 | - | 12 Thr tRNA |
| 813658 | 813734 | - | 77 | 146280397 | PST_0711 | - | 16 Met tRNA |
| 866708 | 868256 | + | 1549 | 146280397 | PST_0759 | - | 16S ribosomal RNA |
| 868336 | 868412 | + | 77 | 146280397 | PST_0760 | - | 14 Ile tRNA |
| 868419 | 868494 | + | 76 | 146280397 | PST_0761 | - | 02 Ala tRNA |
| 868749 | 871649 | + | 2901 | 146280397 | PST_0762 | - | 23S ribosomal RNA |
| 871772 | 871891 | + | 120 | 146280397 | PST_0762a | - | 5S ribosomal RNA |
| 874530 | 874614 | + | 85 | 146280397 | PST_0766 | - | 18 Tyr tRNA |
| 874640 | 874713 | + | 74 | 146280397 | PST_0767 | - | 01 Gly tRNA |
| 874740 | 874815 | + | 76 | 146280397 | PST_0768 | - | 12 Thr tRNA |
| 876145 | 876220 | + | 76 | 146280397 | PST_0770 | - | 20 Trp tRNA |
| 1370963 | 1371036 | - | 74 | 146280397 | PST_1260 | - | 01 Gly tRNA |
| 1471710 | 1471800 | + | 91 | 146280397 | PST_1372 | - | 08 Ser tRNA |
| 1471911 | 1471987 | + | 77 | 146280397 | PST_1373 | - | 11 Arg tRNA |
| 1472057 | 1472133 | + | 77 | 146280397 | PST_1374 | - | 11 Arg tRNA |
| 1479180 | 1479256 | + | 77 | 146280397 | PST_1381 | - | 11 Arg tRNA |
| 1569599 | 1569674 | + | 76 | 146280397 | PST_1463 | - | 12 Thr tRNA |
| 1599509 | 1599578 | + | 70 | 146280397 | PST_1490 | - | 08 Ser tRNA |
| 1766060 | 1766149 | - | 90 | 146280397 | PST_1646 | - | 08 Ser tRNA |
| 1797078 | 1798626 | + | 1549 | 146280397 | PST_1677 | - | 16S ribosomal RNA |
| 1798706 | 1798782 | + | 77 | 146280397 | PST_1678 | - | 14 Ile tRNA |
| 1798789 | 1798864 | + | 76 | 146280397 | PST_1679 | - | 02 Ala tRNA |
| 1799119 | 1802019 | + | 2901 | 146280397 | PST_1680 | - | 23S ribosomal RNA |
| 1802142 | 1802261 | + | 120 | 146280397 | PST_1680a | - | 5S ribosomal RNA |
| 1904615 | 1904691 | - | 77 | 146280397 | PST_1764 | - | 16 Met tRNA |
| 1904851 | 1904927 | - | 77 | 146280397 | PST_1765 | - | 16 Met tRNA |
| 1928959 | 1929034 | + | 76 | 146280397 | PST_1788 | - | 13 Val tRNA |
| 1929072 | 1929148 | + | 77 | 146280397 | PST_1789 | - | 06 Asp tRNA |
| 2160517 | 2160606 | + | 90 | 146280397 | PST_1989 | - | 08 Ser tRNA |
| 2233520 | 2233596 | + | 77 | 146280397 | PST_2055 | - | 11 Arg tRNA |
| 2233630 | 2233705 | + | 76 | 146280397 | PST_2056 | - | 09 His tRNA |
| 2233757 | 2233841 | + | 85 | 146280397 | PST_2057 | - | 15 Leu tRNA |
| 2269935 | 2270010 | + | 76 | 146280397 | PST_2088 | - | 01 Gly tRNA |
| 2270057 | 2270130 | + | 74 | 146280397 | PST_2090 | - | 19 Cys tRNA |
| 2282310 | 2282396 | - | 87 | 146280397 | PST_2106 | - | 15 Leu tRNA |
| 2530610 | 2530729 | - | 120 | 146280397 | PST_2317a | - | 5S ribosomal RNA |
| 2530852 | 2533752 | - | 2901 | 146280397 | PST_2318 | - | 23S ribosomal RNA |
| 2534007 | 2534082 | - | 76 | 146280397 | PST_2319 | - | 02 Ala tRNA |
| 2534089 | 2534165 | - | 77 | 146280397 | PST_2320 | - | 14 Ile tRNA |
| 2534256 | 2535793 | - | 1538 | 146280397 | PST_2321 | - | 16S ribosomal RNA |
| 2584180 | 2584256 | - | 77 | 146280397 | PST_2361 | - | 03 Pro tRNA |
| 2591931 | 2592007 | - | 77 | 146280397 | PST_2370 | - | 13 Val tRNA |
| 2597656 | 2597732 | + | 77 | 146280397 | PST_2378 | - | 03 Pro tRNA |
| 2760167 | 2760242 | - | 76 | 146280397 | PST_2530 | - | 01 Gly tRNA |
| 2760260 | 2760335 | - | 76 | 146280397 | PST_2532 | - | 04 Glu tRNA |
| 2996044 | 2996120 | - | 77 | 146280397 | PST_2771 | - | 06 Asp tRNA |
| 2996134 | 2996209 | - | 76 | 146280397 | PST_2772 | - | 13 Val tRNA |
| 3014370 | 3014459 | - | 90 | 146280397 | PST_2787 | - | 08 Ser tRNA |
| 3024834 | 3024909 | - | 76 | 146280397 | PST_2798 | - | 10 Lys tRNA |
| 3223943 | 3224018 | - | 76 | 146280397 | PST_2992 | - | 04 Glu tRNA |
| 3224061 | 3224136 | - | 76 | 146280397 | PST_2993 | - | 02 Ala tRNA |
| 3224180 | 3224255 | - | 76 | 146280397 | PST_2994 | - | 04 Glu tRNA |
| 3224321 | 3224396 | - | 76 | 146280397 | PST_2995 | - | 02 Ala tRNA |
| 3229814 | 3229889 | + | 76 | 146280397 | PST_2999 | - | 07 Asn tRNA |
| 3282976 | 3283062 | + | 87 | 146280397 | PST_3053 | - | 15 Leu tRNA |
| 3434083 | 3434157 | + | 75 | 146280397 | PST_3187 | - | 05 Gln tRNA |
| 3434216 | 3434290 | + | 75 | 146280397 | PST_3188 | - | 05 Gln tRNA |
| 3493808 | 3493884 | - | 77 | 146280397 | PST_3232 | - | 16 Met tRNA |
| 3513772 | 3513891 | - | 120 | 146280397 | PST_3248a | - | 5S ribosomal RNA |
| 3514035 | 3516937 | - | 2903 | 146280397 | PST_3249 | - | 23S ribosomal RNA |
| 3517190 | 3517265 | - | 76 | 146280397 | PST_3250 | - | 02 Ala tRNA |
| 3517296 | 3517372 | - | 77 | 146280397 | PST_3251 | - | 14 Ile tRNA |
| 3517463 | 3519000 | - | 1538 | 146280397 | PST_3252 | - | 16S ribosomal RNA |
| 3587315 | 3587391 | - | 77 | 146280397 | PST_3313 | - | 16 Met tRNA |
| 3587486 | 3587571 | - | 86 | 146280397 | PST_3314 | - | 15 Leu tRNA |
| 3618456 | 3618530 | + | 75 | 146280397 | PST_3342 | - | 15 Leu tRNA |
| 3927351 | 3927426 | - | 76 | 146280397 | PST_3637 | - | 10 Lys tRNA |
| 3927432 | 3927508 | - | 77 | 146280397 | PST_3638 | - | 03 Pro tRNA |
| 3927518 | 3927593 | - | 76 | 146280397 | PST_3639 | - | 07 Asn tRNA |
| 3956892 | 3956978 | + | 87 | 146280397 | PST_3660 | - | 15 Leu tRNA |
| 3957093 | 3957179 | + | 87 | 146280397 | PST_3662 | - | 15 Leu tRNA |
| 4453509 | 4453584 | + | 76 | 146280397 | PST_4099 | - | 17 Phe tRNA |
